A napari plugin performing joint denoising and segmentation
of microscopy images using DenoiSeg.
If you do not have conda, we recommend installing miniconda or Anaconda.
conda create -n napari-denoiseg python=3.9
conda activate napari-denoiseg
napari
:
pip install "napari[all]==0.4.15"
napari-denoiseg
:
pip install napari-denoiseg
Note: These instructions are for GPU support. Apple’s tensorflow-metal is only officially supported for macOS 12 and higher. For CPU, you can try the Follow the TensorFlow instructions
conda create -n napari-denoiseg -c conda-forge python=3.9 napari pyqt5 imagecodecs
pip install napari-denoiseg
Using the terminal with the napari-denoiseg
environment active, start napari:
napari
Load one of the napari-denoiseg plugin.